质粒名称: | pBabe EGFR Del1 |
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出品公司: | Addgene |
目录编号: | 32062 |
存储实验室: | Matthew Meyerson |
载体骨架基本信息 |
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载体名称: | pBABEpuro |
载体出品公司: | -- |
载体抗性: | 氨苄青霉素 |
空载体大小: | 5169 bp |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 哺乳动物表达,逆转录病毒 |
筛选标记: | 嘌呤霉素 |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | EGFR |
物种来源: | H. sapiens (human) |
插入大小: | 3624 bp |
基因突变: | Del1(E746-A750) |
GenBank编号 | -- |
启动子 | -- |
标签/融合蛋白: | -- |
克隆方法: | 限制性内切酶 |
5' 克隆位点: | SnaB1(克隆过程中销毁) |
3' 克隆位点: | SnaB1(克隆过程中销毁) |
5' 测序引物 | pBABE 5' |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | pBabe EGFR Del1 was a gift from Matthew Meyerson (Addgene plasmid # 32062 ; http://n2t.net/addgene:32062 ; RRID:Addgene_32062) |
参考文献部分: | Allele-dependent variation in the relative cellular potency of distinct EGFR inhibitors. Yuza Y, Glatt KA, Jiang J, Greulich H, Minami Y, Woo MS, Shimamura T, Shapiro G, Lee JC, Ji H, Feng W, Chen TH, Yanagisawa H, Wong KK, Meyerson M. Cancer Biol Ther. 2007 May . 6(5):661-7. 10.4161/cbt.6.5.4003 PubMed 17495523 |
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载体序列
LOCUS pBabe EGFR Del1 8710 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION synthetic circular DNA ACCESSION . VERSION . KEYWORDS pBabe EGFR Del1 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 8710) AUTHORS Yuza Y, Glatt KA, Jiang J, Greulich H, Minami Y, Woo MS, Shimamura T, Shapiro G, Lee JC, Ji H, Feng W, Chen TH, Yanagisawa H, Wong KK, Meyerson M TITLE Allele-dependent variation in the relative cellular potency of distinct EGFR inhibitors. JOURNAL Cancer Biol Ther. 2007 May . 6(5):661-7. PUBMED 17495523 REFERENCE 2 (bases 1 to 8710) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..8710 /organism="synthetic DNA construct" /mol_type="other DNA" LTR 120..589 /note="long terminal repeat from Moloney murine leukemia virus" CDS complement(810..1409) /codon_start=1 /gene="pac from Streptomyces alboniger" /product="puromycin N-acetyltransferase" /label=PuroR /note="confers resistance to puromycin" /translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA" primer_bind complement(893..913) /label=Puro-F /note="Puromycin resistance gene, forward primer" primer_bind 1390..1409 /label=Puro-R /note="Puromycin resistance gene, reverse primer. Also called puro-variant-R" promoter complement(1419..1748) /label=SV40 promoter /note="SV40 enhancer and early promoter" rep_origin 1433..1568 /label=SV40 ori /note="SV40 origin of replication" primer_bind complement(1487..1506) /label=SV40pro-F /note="SV40 promoter/origin, forward primer" primer_bind 1733..1753 /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" CDS complement(5435..5851) /label=gag (truncated) /note="truncated Moloney murine leukemia virus (MMLV) gag gene lacking the start codon" primer_bind complement(5451..5467) /label=pBABE 5' /note="Psi packaging signal, forward primer for pBABE vectors" primer_bind complement(5483..5505) /label=pLXSN 5' /note="Murine stem cell virus, forward primer. Also called MSCV" misc_feature 6052..6251 /label=MMLV Psi /note="packaging signal of Moloney murine leukemia virus (MMLV)" LTR 6316..6785 /note="long terminal repeat from Moloney murine leukemia virus" promoter 6816..6920 /gene="bla" /label=AmpR promoter CDS 6921..7781 /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind complement(7139..7158) /label=Amp-R /note="Ampicillin resistance gene, reverse primer" rep_origin 7941..8529 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 8430..8449 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 8683..8700 /label=L4440 /note="L4440 vector, forward primer" ORIGIN 1 agcgcccaat acgcaaaccg cctctccccg cgcgttggcc gattcattaa tgcaactatg 61 gccatttaat gtaaatactt aagaaaaaaa accaaattaa ttttgataca tgctgcatgt 121 gaaagacccc cgctgacggg tagtcaatca ctcagaggag accctcccaa ggaacagcga 181 gaccacaagt cggatgcaac tgcaagaggg tttattggat acacgggtac ccgggcgact 241 cagtcaatcg gaggactggc gccccgagtg aggggttgtg ggctctttta ttgagctcgg 301 ggagcagaag cgcgcgaaca gaagcgagaa gcgaactgat tggttagttc aaataaggca 361 cagggtcatt tcaggtcctt ggggcaccct ggaaacatct gatggttctc tagaaactgc 421 tgagggctgg accgcatctg gggaccatct gttcttggcc ctgagccggg gcaggaactg 481 cttaccacag atatcctgtt tggcccatat tcagctgttc catctgttct tggccctgag 541 ccggggcagg aactgcttac cacagatatc ctgtttggcc catattcagc tgttccatct 601 gttcctgacc ttgatctgaa cttctctatt ctcagttatg tatttttcca tgccttgcaa 661 aatggcgtta cttaagctag cttgccaaac ctacaggtgg ggtctttcat tccccccttt 721 ttctggagac taaataaaat cttttatttt atcgatgcat ggggtcgtgc gctcctttcg 781 gtcgggcgct gcgggtcgtg gggcgggcgt caggcaccgg gcttgcgggt catgcaccag 841 gtgcgcggtc cttcgggcac ctcgacgtcg gcggtgacgg tgaagccgag ccgctcgtag 901 aaggggaggt tgcggggcgc ggaggtctcc aggaaggcgg gcaccccggc gcgctcggcc 961 gcctccactc cggggagcac gacggcgctg cccagaccct tgccctggtg gtcgggcgag 1021 acgccgacgg tggccaggaa ccacgcgggc tccttgggcc ggtgcggcgc caggaggcct 1081 tccatctgtt gctgcgcggc cagccgggaa ccgctcaact cggccatgcg cgggccgatc 1141 tcggcgaaca ccgcccccgc ttcgacgctc tccggcgtgg tccagaccgc caccgcggcg 1201 ccgtcgtccg cgacccacac cttgccgatg tcgagcccga cgcgcgtgag gaagagttct 1261 tgcagctcgg tgacccgctc gatgtggcgg tccggatcga cggtgtggcg cgtggcgggg 1321 tagtcggcga acgcggcggc gagggtgcgt acggccctgg ggacgtcgtc gcgggtggcg 1381 aggcgcaccg tgggcttgta ctcggtcatg gtaagctttt tgcaaaagcc taggcctcca 1441 aaaaagcctc ctcactactt ctggaatagc tcagaggccg aggcggcctc ggcctctgca 1501 taaataaaaa aaattagtca gccatggggc ggagaatggg cggaactggg cggagttagg 1561 ggcgggatgg gcggagttag gggcgggact atggttgctg actaattgag atgcatgctt 1621 tgcatacttc tgcctgctgg ggagcctggg gactttccac acctggttgc tgactaattg 1681 agatgcatgc tttgcatact tctgcctgct ggggagcctg gggactttcc acaccctaac 1741 tgacacacat tccacagggt cgaccactgt gctggcgaat tcctacatct catgctccaa 1801 taaattcact gctttgtggc gcgaccctta ggtattctgc attttcagct gtggagccct 1861 taaagatgcc atttggcttg gcttccttgg gaaagaagtc ctgctggtag tcagggttgt 1921 ccaggctaat ttggtggctg cctttctggg cccagtgggc agggctgtcg aatgtgctgt 1981 tgacacaggt gggctggaca gtgttgagat actcggggtt gcccactgca gtgctgtggg 2041 ggtcctggta gtgtgggtct ctgctgggcg cggggttcag aggctgattg tgatagacag 2101 gattctgcac agagccagcg ggccttttgg gaacggactg gtttatgtat tcaggcactg 2161 ggaggaaggt gtcgtctatg ctgtcctcag tcaaggcgcc tgtggggtct gagctgtatc 2221 gctgcaagaa gctgtcttcc ttgatgggac agctttgcag cccatttcta tcaatgcaag 2281 ccacggtgga attgttgctg gttgcactca gagagctcag gaggggagtc cgtgacgtgg 2341 aggggctgct gaagaagccc tgctgtggga tgaggtactc gtcggcatcc accacgtcgt 2401 ccatgtcttc ttcatccatc agggcacggt agaagttgga gtctgtagga cttggcaaat 2461 gcattctttc atccccctga atgacaaggt agcgctgggg gtctcgggcc attttggaga 2521 attcgatgat caactcacgg aactttgggc gactatctgc gtctatcatc cagcacttga 2581 ccatgatcat gtagacatcg atggtacata tgggtggctg agggaggcgt tctcctttct 2641 ccaggatgga ggagatctcg ctggcaggga ttccgtcata tggcttggat ccaaaggtca 2701 tcaactccca aacggtcacc ccgtagctcc agacatcact ctggtgggta tagattctgt 2761 gtaaaattga ttccaatgcc atccacttga taggcacttt gcctccttct gcatggtatt 2821 ctttctcttc cgcacccagc agtttggcca gcccaaaatc tgtgatcttg acatgctgcg 2881 gtgttttcac cagtacgttc ctggctgcca ggtcgcggtg caccaagcga cggtcctcca 2941 agtagttcat gccctttgcg atctgcacac accagttgag caggtactgg gagccaatat 3001 tgtctttgtg ttcccggaca tagtccagga ggcagccgaa gggcatgagc tgcgtgatga 3061 gttgcacggt ggaggtgagg cagatgccca gcaggcggca cacgtggggg ttgtccacgc 3121 tggccatcac gtaggcttca tcgaggattt ccttgttggc tttcggagat gttttgatag 3181 cgacgggaat tttaactttc tcaccttctg ggatccagag tcccttatac accgtgccga 3241 acgcaccgga gcccagcact ttgatctttt tgaattcagt ttccttcaag atcctcaaga 3301 gagcttggtt gggagcttct ccactgggtg taagaggctc cacaagctcc ctctcctgca 3361 gcagcctccg cagcgtgcgc ttccgaacga tgtggcgcct tcgcatgaag aggccgatcc 3421 ccagggccac caccagcagc aagaggaggg cccccaccat cccagtggcg atggacggga 3481 tcttaggccc attcgttgga cagccttcaa gacctggccc agtgcatccg taggtgcagt 3541 ttggatggca caggtggcac acatggccgg cgtctgcgta cttccagacc agggtgttgt 3601 tttctcccat gactcctgcc gggcaggtct tgacgcagtg ggggccgtca atgtagtggg 3661 cacactggat acagttgtct ggtccccgtc ctgtgcaggt gatgttcatg gcctgaggca 3721 ggcactctgg gtggcactgt atgcactcag agttctccac aaactccctt ggctcaccct 3781 ccagaaggtt gcacttgtcc acgcattccc tgcctcggct gacattccgg caagagacgc 3841 agtccctggg ctccgggccc cagcagccct cgggggagca caaggcatgg cagacctggc 3901 ctgtggcctt gcagctgttt tcacctctgt tgcttataat tttggttttc tgaccggagg 3961 tcccaaacag ttttttccag tttattgtat ttgcatagca caaatttttg tttcctgaaa 4021 ttatcacatc tccatcactt atctccttga gggagcgtaa tcccaaggat gttatgttca 4081 ggctgacgac tgcaagagaa aactgaccat gttgcttggt cctgccgcgt atgatttcta 4141 ggttctcaaa ggcatggagg tccgtcctgt tttcaggcca agcctgaatc agcaaaaacc 4201 ctgtgatttc ctttacggtt ttcagaatat ccagttcctg tggatccaga ggaggagtat 4261 gtgtgaagga gtcaccccta aatgccaccg gcaggatgtg gagatcgcca ctgatggagg 4321 tgcagttttt gaagtgttta atattcgtag catttatgga gagtgagtct ttaaattcac 4381 caatacctat tccgttacac actttgcggc aaggcccttc gcacttctta cacttgcgga 4441 cgccgtcttc ctccatctca tagctgtcgg ccccacaggc tcggacgcac gagccgtgat 4501 ctgtcaccac ataattacgg ggacacttct tcacgcaggt ggcaccaaag ctgtatttgc 4561 cctcggggtt cacatccatc tggtacgtgg tggggttgta gagcatgagt ggggggcagg 4621 tgtccttgca cgtggcttcg tctcggaatt tgcggcagac caggcagtcg ctctcccggg 4681 ggcctgtgca gcctgcagca cactggttgt ggcagcagtc actgggggac ttgccacggc 4741 agcgcccgga gcactgctgg gcacagatga ttttggtcag tttctggcag ttctcctctc 4801 ctgcacccca gcagctccca ttgggacagc ttggatcaca cttttggcag ctgcccaggt 4861 ggttctggaa gtccatcgac atgttgctga gaaagtcact gctgactatg tcccgccact 4921 ggatgctctc cacgttgcac agggcagggt tgttgctgaa ccgcacggcg ccatgcagga 4981 tttcctgtaa atttctcatg ggcagctcct tcagtccggt tttatttgca tcatagttag 5041 ataagactgc taaggcatag gaattttcgt agtacatatt tcctctgatg atctgcaggt 5101 tttccaaagg aattcgctcc actgtgttga gggcaatgag gacataacca gccacctcct 5161 ggatggtctt taagaaggaa agatcataat tcctctgcac ataggtaatt tccaaattcc 5221 caaggaccac ctcacagtta ttgaacatcc tctggaggct gagaaaatga tcttcaaaag 5281 tgcccaactg cgtgagcttg ttactcgtgc cttggcaaac tttcttttcc tccagagccc 5341 gactcgccgg gcagagcgca gccagcagcg ccaggagcgc tgccccggcc gtcccggagg 5401 gtcgcatgat gtaccaccac actgggatcc ggccggcgcc tagagaagga gtgagggctg 5461 gataaaggga ggatcgaggc ggggtcgaac gaggaggttc aagggggaga gacggggcgg 5521 atggaggaag aggaggcgga ggcttagggt gtacaaaggg cttgacccag ggaggggggt 5581 caaaagccaa ggcttcccag gtcacgatgt aggggacctg gtctgggtgt ccatgcgggc 5641 caggtgaaaa gaccttgatc ttaacctggg tgatgaggtc tcggttaaag gtgccgtctc 5701 gcggccatcc gacgttaaag gttggccatt ctgcagagca gaaggtaacc caacgtctct 5761 tcttgacatc taccgactgg ttgtgagcga tccgctcgac atctttccag tgacctaagg 5821 tcaaacttaa gggagtggta acagtctggc cctaattttc agacaaatac agaaacacag 5881 tcagacagag acaacacaga acgatgctgc agcgctgcag cagacaagac gcgcggcttc 5941 ggttccaaac cgaaagcaaa aattcagacg gaggcgggaa ctgttttagg ttctcgtctc 6001 ctaccagaac cacatatcct gacggggtcg gattccacat cgactccctt cctcaggtcg 6061 ggccacaaaa acggccccca aagtccctgg gacgtctccc agggttgcgg ccgggtgttc 6121 agaactcgtc agttccacca cgggtccgcc agatacagag ctagttagct aactagtacc 6181 gacgcaggcg cataaaatca gtcatagaca ctagacaatc ggacagacac agataagttg 6241 ctggccagct tgcctcccgg tggtgggtcg gtggtccctg ggcaggggtc tcccgatccc 6301 ggacgagccc ccaaatgaaa gacccccgct gacgggtagt caatcactca gaggagaccc 6361 tcccaaggaa cagcgagacc acaagtcgga tgcaactgca agagggttta ttggatacac 6421 gggtacccgg gcgactcagt caatcggagg actggcgccc cgagtgaggg gttgtgggct 6481 cttttattga gctcggggag cagaagcgcg cgaacagaag cgagaagcga actgattggt 6541 tagttcaaat aaggcacagg gtcatttcag gtccttgggg caccctggaa acatctgatg 6601 gttctctaga aactgctgag ggctggaccg catctgggga ccatctgttc ttggccctga 6661 gccggggcag gaactgctta ccacagatat cctgtttggc ccatattcag ctgttccatc 6721 tgttcttggc cctgagccgg ggcaggaact gcttaccaca gatatcctgt ttggcccata 6781 ttcaggctgc aggtggcact tttcggggaa atgtgcgcgg aacccctatt tgtttatttt 6841 tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa atgcttcaat 6901 aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt attccctttt 6961 ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa gtaaaagatg 7021 ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac agcggtaaga 7081 tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt aaagttctgc 7141 tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt cgccgcatac 7201 actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat cttacggatg 7261 gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac actgcggcca 7321 acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg cacaacatgg 7381 gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc ataccaaacg 7441 acgagcgtga caccacgatg cctgtagcaa tggcaacaac gttgcgcaaa ctattaactg 7501 gcgaactact tactctagct tcccggcaac aattaataga ctggatggag gcggataaag 7561 ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct gataaatctg 7621 gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat ggtaagccct 7681 cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa cgaaatagac 7741 agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac caagtttact 7801 catatatact ttagattgat ttgcggccgc aaaaggatct aggtgaagat cctttttgat 7861 aatctcatga ccaaaatccc ttaacgtgag ttttcgttcc actgagcgtc agaccccgta 7921 gaaaagatca aaggatcttc ttgagatcct ttttttctgc gcgtaatctg ctgcttgcaa 7981 acaaaaaaac caccgctacc agcggtggtt tgtttgccgg atcaagagct accaactctt 8041 tttccgaagg taactggctt cagcagagcg cagataccaa atactgttct tctagtgtag 8101 ccgtagttag gccaccactt caagaactct gtagcaccgc ctacatacct cgctctgcta 8161 atcctgttac cagtggctgc tgccagtggc gataagtcgt gtcttaccgg gttggactca 8221 agacgatagt taccggataa ggcgcagcgg tcgggctgaa cggggggttc gtgcacacag 8281 cccagcttgg agcgaacgac ctacaccgaa ctgagatacc tacagcgtga gctatgagaa 8341 agcgccacgc ttcccgaagg gagaaaggcg gacaggtatc cggtaagcgg cagggtcgga 8401 acaggagagc gcacgaggga gcttccaggg ggaaacgcct ggtatcttta tagtcctgtc 8461 gggtttcgcc acctctgact tgagcgtcga tttttgtgat gctcgtcagg ggggcggagc 8521 ctatggaaaa acgccagcaa cgcggccttt ttacggttcc tggccttttg ctggcctttt 8581 gctcacatgt tctttcctgc gttatcccct gattctgtgg ataaccgtat taccgccttt 8641 gagtgagctg ataccgctcg ccgcagccga acgaccgagc gcagcgagtc agtgagcgag 8701 gaagcggaag //
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